Modeling Microbial Growth Curves with GCAT
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| Publicado en: | Bioenergy Research vol. 8, no. 3 (Sep 2015), p. 1022 |
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| Autor principal: | |
| Otros Autores: | , , , , , , |
| Publicado: |
Springer Nature B.V.
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| Materias: | |
| Acceso en línea: | Citation/Abstract Full Text Full Text - PDF |
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| 100 | 1 | |a Bukhman, Yury V | |
| 245 | 1 | |a Modeling Microbial Growth Curves with GCAT | |
| 260 | |b Springer Nature B.V. |c Sep 2015 | ||
| 513 | |a Feature | ||
| 520 | 3 | |a Issue Title: The US Department of Energy Bioenergy Research Centers: The First 7 Years In this work, we introduce the Growth Curve Analysis Tool (GCAT). GCAT is designed to enable efficient analysis of high-throughput microbial growth curve data collected from cultures grown in microtiter plates. GCAT is accessible through a web browser, making it easy to use and operating system independent. GCAT implements fitting of global sigmoid curve models and local regression (LOESS) model. We assess the relative merits of these approaches using experimental data. Additionally, GCAT implements heuristics to deal with some peculiarities of growth curve data commonly encountered in bioenergy research. GCAT server is publicly available at http://gcat-pub.glbrc.org/. The source code is available at http://code.google.com/p/gcat-hts/. | |
| 651 | 4 | |a United States--US | |
| 653 | |a Studies | ||
| 653 | |a Bioenergetics | ||
| 653 | |a Cellular biology | ||
| 653 | |a Software packages | ||
| 653 | |a Computer based modeling | ||
| 653 | |a Web browsers | ||
| 653 | |a Glucose | ||
| 653 | |a User interface | ||
| 653 | |a Software | ||
| 653 | |a Growth models | ||
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| 653 | |a Public domain | ||
| 653 | |a Yeast | ||
| 653 | |a Environmental | ||
| 700 | 1 | |a Dipiazza, Nathan W | |
| 700 | 1 | |a Piotrowski, Jeff | |
| 700 | 1 | |a Shao, Jason | |
| 700 | 1 | |a Halstead, Adam G; W | |
| 700 | 1 | |a Bui, Minh Duc | |
| 700 | 1 | |a Xie, Enhai | |
| 700 | 1 | |a Sato, Trey K | |
| 773 | 0 | |t Bioenergy Research |g vol. 8, no. 3 (Sep 2015), p. 1022 | |
| 786 | 0 | |d ProQuest |t ABI/INFORM Global | |
| 856 | 4 | 1 | |3 Citation/Abstract |u https://www.proquest.com/docview/1709352609/abstract/embedded/7BTGNMKEMPT1V9Z2?source=fedsrch |
| 856 | 4 | 0 | |3 Full Text |u https://www.proquest.com/docview/1709352609/fulltext/embedded/7BTGNMKEMPT1V9Z2?source=fedsrch |
| 856 | 4 | 0 | |3 Full Text - PDF |u https://www.proquest.com/docview/1709352609/fulltextPDF/embedded/7BTGNMKEMPT1V9Z2?source=fedsrch |