An RNA Splicing System that Excises Transposons from Animal mRNAs

محفوظ في:
التفاصيل البيبلوغرافية
الحاوية / القاعدة:bioRxiv (Feb 17, 2025)
المؤلف الرئيسي: Long-Wen, Zhao
مؤلفون آخرون: Nardone, Christopher, Paulo, Joao A, Elledge, Stephen, Kennedy, Scott
منشور في:
Cold Spring Harbor Laboratory Press
الموضوعات:
الوصول للمادة أونلاين:Citation/Abstract
Full text outside of ProQuest
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MARC

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024 7 |a 10.1101/2025.02.14.638102  |2 doi 
035 |a 3167782959 
045 0 |b d20250217 
100 1 |a Long-Wen, Zhao 
245 1 |a An RNA Splicing System that Excises Transposons from Animal mRNAs 
260 |b Cold Spring Harbor Laboratory Press  |c Feb 17, 2025 
513 |a Working Paper 
520 3 |a All genomes harbor mobile genetic parasites called transposable elements (TEs). Here we describe a system, which we term SOS splicing, that protects C. elegans and human genes from DNA transposon-mediated disruption by excising these TEs from host mRNAs. SOS splicing, which operates independently of the spliceosome, is a pattern recognition system triggered by base-pairing of inverted terminal repeat elements, which are a defining feature of the DNA transposons. We identify three factors required for SOS splicing in both C. elegans and human cells; AKAP17A, which binds TE-containing mRNAs; the RNA ligase RTCB; and CAAP1, which bridges RTCB and AKAP17A, allowing RTCB to ligate mRNA fragments generated by TE excision. We propose that SOS splicing is a novel, conserved, and RNA structure-directed mode of mRNA splicing and that one function of SOS splicing is to genetically buffer animals from the deleterious effects of TE-mediated gene perturbation.Competing Interest StatementS.J.E. is a founder of TSCAN Therapeutics, MAZE Therapeutics, ImmuneID, and Mirimus, serves on the scientific advisory boards of Homology Medicines, ImmuneID, MAZE Therapeutics, X-Chem, and TSCAN Therapeutics, and is an advisor for MPM Capital. Other authors declare no competing interests. 
653 |a Transposons 
653 |a Structure-function relationships 
653 |a mRNA 
653 |a Splicing 
653 |a RNA ligase 
653 |a Homology 
653 |a Pattern recognition 
653 |a Pattern recognition systems 
700 1 |a Nardone, Christopher 
700 1 |a Paulo, Joao A 
700 1 |a Elledge, Stephen 
700 1 |a Kennedy, Scott 
773 0 |t bioRxiv  |g (Feb 17, 2025) 
786 0 |d ProQuest  |t Biological Science Database 
856 4 1 |3 Citation/Abstract  |u https://www.proquest.com/docview/3167782959/abstract/embedded/7BTGNMKEMPT1V9Z2?source=fedsrch 
856 4 0 |3 Full text outside of ProQuest  |u https://www.biorxiv.org/content/10.1101/2025.02.14.638102v1