Characterization of neurite and soma organization in the brain and spinal cord with diffusion MRI

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Vydáno v:bioRxiv (Feb 21, 2025)
Hlavní autor: Schilling, Kurt
Další autoři: Palombo, Marco, Witt, Atlee A, O'grady, Kristin P, Pizzolato, Marco P, Landman, Bennett A, Smith, Seth A
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Cold Spring Harbor Laboratory Press
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022 |a 2692-8205 
024 7 |a 10.1101/2025.02.19.638936  |2 doi 
035 |a 3169265981 
045 0 |b d20250221 
100 1 |a Schilling, Kurt 
245 1 |a Characterization of neurite and soma organization in the brain and spinal cord with diffusion MRI 
260 |b Cold Spring Harbor Laboratory Press  |c Feb 21, 2025 
513 |a Working Paper 
520 3 |a The central nervous system (CNS), comprised of both the brain and spinal cord, and is a complex network of white and gray matter responsible for sensory, motor, and cognitive functions. Advanced diffusion MRI (dMRI) techniques offer a promising mechanism to non-invasively characterize CNS architecture, however, most studies focus on the brain or spinal cord in isolation. Here, we implemented a clinically feasible dMRI protocol on a 3T scanner to simultaneously characterize neurite and soma microstructure of both the brain and spinal cord. The protocol enabled the use of Diffusion Tensor Imaging (DTI), Standard Model Imaging (SMI), and Soma and Neurite Density Imaging (SANDI), representing the first time SMI and SANDI have been evaluated in the cord, and in the cord and brain simultaneously. Our results demonstrate high image quality even at high diffusion weightings, reproducibility of SMI and SANDI derived metrics similar to those of DTI with few exceptions, and biologically feasible contrasts between and within white and gray matter regions. Reproducibility and contrasts were decreased in the cord compared to that of the brain, revealing challenges due to partial volume effects and image preprocessing. This study establishes a harmonized approach for brain and cord microstructural imaging, and the opportunity to study CNS pathologies and biomarkers of structural integrity across the neuroaxis.Competing Interest StatementThe authors have declared no competing interest. 
653 |a Brain architecture 
653 |a Spinal cord 
653 |a Magnetic resonance imaging 
653 |a Substantia grisea 
653 |a Central nervous system 
653 |a Neuraxis 
653 |a Cognitive ability 
653 |a Neuroimaging 
653 |a Reproducibility 
700 1 |a Palombo, Marco 
700 1 |a Witt, Atlee A 
700 1 |a O'grady, Kristin P 
700 1 |a Pizzolato, Marco P 
700 1 |a Landman, Bennett A 
700 1 |a Smith, Seth A 
773 0 |t bioRxiv  |g (Feb 21, 2025) 
786 0 |d ProQuest  |t Biological Science Database 
856 4 1 |3 Citation/Abstract  |u https://www.proquest.com/docview/3169265981/abstract/embedded/L8HZQI7Z43R0LA5T?source=fedsrch 
856 4 0 |3 Full Text - PDF  |u https://www.proquest.com/docview/3169265981/fulltextPDF/embedded/L8HZQI7Z43R0LA5T?source=fedsrch 
856 4 0 |3 Full text outside of ProQuest  |u https://www.biorxiv.org/content/10.1101/2025.02.19.638936v1