Εξώφυλλο

Parallelization of Gillespie algorithm based on binary words

Αποθηκεύτηκε σε:
Εκδόθηκε σε:arXiv.org (Dec 21, 2024), p. n/a
Κύριος συγγραφέας: Lacoste, David
Άλλοι συγγραφείς: Castellana, Michele
Έκδοση:
Cornell University Library, arXiv.org
Θέματα:
Parallel processing
Algorithms
Independent variables
Διαθέσιμο Online:Citation/Abstract
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Περίληψη:We present an improvement of the Gillespie Exact Stochastic Simulation Algorithm, which leverages a bitwise representation of variables to perform independent simulations in parallel. We show that the subsequent gain in computational yield is significant, and it may allow to perform simulations of non-well mixed chemical systems. We illustrate this idea with simulations of Frank model, originally introduced to explain the emergence of homochirality in prebiotic systems.
ISSN:2331-8422
Πηγή:Engineering Database